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Object org::openscience::cdk::interfaces::IChemObject::clone (  )  throws CloneNotSupportedException [inherited]

Returns a deep clone of this IChemObject.

Returns:
Object the clone of this IChemObject.
Exceptions:
CloneNotSupportedException if the IChemObject cannot be cloned

Implemented in org::openscience::cdk::AminoAcid, org::openscience::cdk::Atom, org::openscience::cdk::AtomContainer, org::openscience::cdk::AtomContainerSet, org::openscience::cdk::AtomParity, org::openscience::cdk::AtomType, org::openscience::cdk::BioPolymer, org::openscience::cdk::Bond, org::openscience::cdk::ChemFile, org::openscience::cdk::ChemModel, org::openscience::cdk::ChemObject, org::openscience::cdk::ChemSequence, org::openscience::cdk::Crystal, org::openscience::cdk::debug::DebugAminoAcid, org::openscience::cdk::debug::DebugAtom, org::openscience::cdk::debug::DebugAtomContainer, org::openscience::cdk::debug::DebugAtomContainerSet, org::openscience::cdk::debug::DebugAtomParity, org::openscience::cdk::debug::DebugAtomType, org::openscience::cdk::debug::DebugBioPolymer, org::openscience::cdk::debug::DebugBond, org::openscience::cdk::debug::DebugChemFile, org::openscience::cdk::debug::DebugChemModel, org::openscience::cdk::debug::DebugChemObject, org::openscience::cdk::debug::DebugChemSequence, org::openscience::cdk::debug::DebugCrystal, org::openscience::cdk::debug::DebugElectronContainer, org::openscience::cdk::debug::DebugElement, org::openscience::cdk::debug::DebugIsotope, org::openscience::cdk::debug::DebugLonePair, org::openscience::cdk::debug::DebugMapping, org::openscience::cdk::debug::DebugMolecule, org::openscience::cdk::debug::DebugMoleculeSet, org::openscience::cdk::debug::DebugMonomer, org::openscience::cdk::debug::DebugPolymer, org::openscience::cdk::debug::DebugPseudoAtom, org::openscience::cdk::debug::DebugReaction, org::openscience::cdk::debug::DebugReactionSet, org::openscience::cdk::debug::DebugRing, org::openscience::cdk::debug::DebugSingleElectron, org::openscience::cdk::debug::DebugStrand, org::openscience::cdk::ElectronContainer, org::openscience::cdk::Element, org::openscience::cdk::Isotope, org::openscience::cdk::LonePair, org::openscience::cdk::Mapping, org::openscience::cdk::Molecule, org::openscience::cdk::MoleculeSet, org::openscience::cdk::PeriodicTableElement, org::openscience::cdk::Polymer, org::openscience::cdk::PseudoAtom, org::openscience::cdk::Reaction, org::openscience::cdk::ReactionSet, org::openscience::cdk::RingSet, org::openscience::cdk::SingleElectron, and org::openscience::cdk::Strand.

Referenced by org::openscience::cdk::applications::jchempaint::action::EditAction::actionPerformed(), org::openscience::cdk::applications::jchempaint::action::CreateReactionAction::actionPerformed(), org::openscience::cdk::applications::jchempaint::action::CopyPasteAction::actionPerformed(), org::openscience::cdk::applications::jchempaint::action::AdjustBondOrdersAction::actionPerformed(), org::openscience::cdk::applications::swing::MoleculeListViewer::addStructure(), org::openscience::cdk::charges::GasteigerPEPEPartialCharges::assignGasteigerPiPartialCharges(), org::openscience::cdk::qsar::descriptors::molecular::XLogPDescriptor::calculate(), org::openscience::cdk::qsar::descriptors::molecular::TPSADescriptor::calculate(), org::openscience::cdk::qsar::descriptors::molecular::MDEDescriptor::calculate(), org::openscience::cdk::qsar::descriptors::molecular::HBondDonorCountDescriptor::calculate(), org::openscience::cdk::qsar::descriptors::molecular::HBondAcceptorCountDescriptor::calculate(), org::openscience::cdk::qsar::descriptors::molecular::CPSADescriptor::calculate(), org::openscience::cdk::qsar::descriptors::molecular::AromaticBondsCountDescriptor::calculate(), org::openscience::cdk::qsar::descriptors::molecular::AromaticAtomsCountDescriptor::calculate(), org::openscience::cdk::qsar::descriptors::bond::ResonancePositiveChargeDescriptor::calculate(), org::openscience::cdk::qsar::descriptors::bond::IPBondDescriptor::calculate(), org::openscience::cdk::qsar::descriptors::atompair::PiContactDetectionDescriptor::calculate(), org::openscience::cdk::qsar::descriptors::atomic::IsProtonInConjugatedPiSystemDescriptor::calculate(), org::openscience::cdk::qsar::descriptors::atomic::IsProtonInAromaticSystemDescriptor::calculate(), org::openscience::cdk::qsar::descriptors::atomic::IPAtomicDescriptor::calculate(), org::openscience::cdk::AtomParity::clone(), org::openscience::cdk::AtomContainer::clone(), org::openscience::cdk::config::AtomTypeFactory::getAtomTypes(), org::openscience::cdk::config::IsotopeFactory::getMajorIsotope(), org::openscience::cdk::reaction::type::RearrangementRadical3Reaction::initiate(), org::openscience::cdk::reaction::type::RearrangementRadical2Reaction::initiate(), org::openscience::cdk::reaction::type::RearrangementRadical1Reaction::initiate(), org::openscience::cdk::reaction::type::RearrangementCation3Reaction::initiate(), org::openscience::cdk::reaction::type::RearrangementCation2Reaction::initiate(), org::openscience::cdk::reaction::type::RearrangementCation1Reaction::initiate(), org::openscience::cdk::reaction::type::RearrangementAnion3Reaction::initiate(), org::openscience::cdk::reaction::type::RearrangementAnion2Reaction::initiate(), org::openscience::cdk::reaction::type::RearrangementAnion1Reaction::initiate(), org::openscience::cdk::reaction::type::RadicalSiteInitiationReaction::initiate(), org::openscience::cdk::reaction::type::RadicalSiteInitiationHReaction::initiate(), org::openscience::cdk::reaction::type::HyperconjugationReaction::initiate(), org::openscience::cdk::reaction::type::ElectronImpactPDBReaction::initiate(), org::openscience::cdk::reaction::type::ElectronImpactNBEReaction::initiate(), org::openscience::cdk::reaction::type::DisplacementChargeFromDonorReaction::initiate(), org::openscience::cdk::reaction::type::DisplacementChargeFromAcceptorReaction::initiate(), org::openscience::cdk::reaction::type::CleavageBondReaction::initiate(), org::openscience::cdk::reaction::type::CleavageBondMultiReaction::initiate(), org::openscience::cdk::reaction::type::CarbonylEliminationReaction::initiate(), org::openscience::cdk::reaction::type::BreakingBondReaction::initiate(), org::openscience::cdk::tools::IsotopeGenerator::mixer(), org::openscience::cdk::smiles::SmilesParser::parseSmiles(), org::openscience::cdk::isomorphism::UniversalIsomorphismTester::project(), org::openscience::cdk::structgen::RandomGenerator::proposeStructure(), org::openscience::cdk::tools::manipulator::AtomContainerManipulator::removeHydrogens(), org::openscience::cdk::structgen::VicinitySampler::sample(), org::openscience::cdk::layout::StructureDiagramGenerator::setMolecule(), and org::openscience::cdk::io::SVGWriter::writeAtomContainer().


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