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void org::openscience::cdk::interfaces::IAtomType::setFormalCharge ( int  charge  )  [inherited]

Sets the formal charge of this atom.

Parameters:
charge The formal charge
See also:
getFormalCharge

Implemented in org::openscience::cdk::AtomType, org::openscience::cdk::debug::DebugAtom, org::openscience::cdk::debug::DebugAtomType, org::openscience::cdk::debug::DebugPseudoAtom, and org::openscience::cdk::PseudoAtom.

Referenced by org::openscience::cdk::iupac::parser::MoleculeBuilder::addFunGroup(), org::openscience::cdk::tools::manipulator::AtomTypeManipulator::configure(), org::openscience::cdk::atomtype::EStateAtomTypeMatcher::findMatchingAtomType(), org::openscience::cdk::inchi::InChIToStructure::generateAtomContainerFromInchi(), org::openscience::cdk::reaction::type::RearrangementCation3Reaction::initiate(), org::openscience::cdk::reaction::type::RearrangementCation2Reaction::initiate(), org::openscience::cdk::reaction::type::RearrangementCation1Reaction::initiate(), org::openscience::cdk::reaction::type::RearrangementAnion3Reaction::initiate(), org::openscience::cdk::reaction::type::RearrangementAnion2Reaction::initiate(), org::openscience::cdk::reaction::type::RearrangementAnion1Reaction::initiate(), org::openscience::cdk::reaction::type::HyperconjugationReaction::initiate(), org::openscience::cdk::reaction::type::ElectronImpactPDBReaction::initiate(), org::openscience::cdk::reaction::type::ElectronImpactNBEReaction::initiate(), org::openscience::cdk::reaction::type::DisplacementChargeFromDonorReaction::initiate(), org::openscience::cdk::reaction::type::DisplacementChargeFromAcceptorReaction::initiate(), org::openscience::cdk::reaction::type::CarbonylEliminationReaction::initiate(), org::openscience::cdk::reaction::type::BreakingBondReaction::initiate(), org::openscience::cdk::tools::Normalizer::normalize(), org::openscience::cdk::io::MDLV3000Reader::readAtomBlock(), org::openscience::cdk::io::MDLV2000Reader::readMolecule(), org::openscience::cdk::io::MDLReader::readMolecule(), and org::openscience::cdk::io::iterator::event::EventCMLHandler::setObjectProperty().


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